North West Genomics Testing Workflow (GTW)
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DRAFT Implementation Guide

This is for collaboration and discussion purposes and is subject to change.

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: Specimen Example - TTL Representation

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@prefix fhir: <http://hl7.org/fhir/> .
@prefix owl: <http://www.w3.org/2002/07/owl#> .
@prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .
@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .

# - resource -------------------------------------------------------------------

 a fhir:Specimen ;
  fhir:nodeRole fhir:treeRoot ;
  fhir:id [ fhir:v "SpecimenExample"] ; # 
  fhir:meta [
fhir:versionId [ fhir:v "1.0" ]
  ] ; # 
  fhir:text [
fhir:status [ fhir:v "generated" ] ;
fhir:div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p class=\"res-header-id\"><b>Generated Narrative: Specimen SpecimenExample</b></p><a name=\"SpecimenExample\"> </a><a name=\"hcSpecimenExample\"> </a><a name=\"SpecimenExample-en-GB\"> </a><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">version: 1.0</p></div><p><b>identifier</b>: <code>https://fhir.mft.nhs.uk/Id/Specimen/Beaker</code>/25GEN-029GN00001</p><p><b>accessionIdentifier</b>: Accession ID/1001166717</p><p><b>status</b>: Available</p><p><b>subject</b>: <a href=\"Bundle-FHIRDocumentGeneticReportBundle.html#urn-uuid-d6faafcf-db64-4c11-9da8-25f36774c1bd\">Octavia CHISLETT</a></p></div>"^^rdf:XMLLiteral
  ] ; # 
  fhir:identifier ( [
fhir:system [ fhir:v "https://fhir.mft.nhs.uk/Id/Specimen/Beaker"^^xsd:anyURI ] ;
fhir:value [ fhir:v "25GEN-029GN00001" ] ;
fhir:assigner [
fhir:identifier [
fhir:system [ fhir:v "https://fhir.nhs.uk/Id/ods-organization-code"^^xsd:anyURI ] ;
fhir:value [ fhir:v "R0A" ]       ]     ]
  ] ) ; # 
  fhir:accessionIdentifier [
fhir:type [
      ( fhir:coding [
fhir:system [ fhir:v "http://terminology.hl7.org/CodeSystem/v2-0203"^^xsd:anyURI ] ;
fhir:code [ fhir:v "ACSN" ]       ] )     ] ;
fhir:system [ fhir:v "https://fhir.mft.nhs.uk/Id/AccessionNumber/Beaker"^^xsd:anyURI ] ;
fhir:value [ fhir:v "1001166717" ] ;
fhir:assigner [
fhir:identifier [
fhir:system [ fhir:v "https://fhir.nhs.uk/Id/ods-organization-code"^^xsd:anyURI ] ;
fhir:value [ fhir:v "690S0" ]       ]     ]
  ] ; # 
  fhir:status [ fhir:v "available"] ; # 
  fhir:subject [
fhir:reference [ fhir:v "urn:uuid:d6faafcf-db64-4c11-9da8-25f36774c1bd" ] ;
fhir:identifier [
fhir:system [ fhir:v "https://fhir.nhs.uk/Id/nhs-number"^^xsd:anyURI ] ;
fhir:value [ fhir:v "9449305552" ]     ] ;
fhir:display [ fhir:v "Octavia CHISLETT" ]
  ] . #